23 Publications by "I. Ersoy"

22 CIVA Publications and 1 external publications


#176: Z. Liang, S. Jaeger, G. Thoma, J. Huang, P. Guo, A. Powell, K. Silamut, I. Ersoy, M. Poostchi, K. Palaniappan, and R. J. Maude

CNN - Based Image Analysis for Malaria Diagnosis

Proc. IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 2016

deep learning, malaira, cells, classification, biomedical

Abstract, Bibtex, PlainText, Google Scholar
L. Alzubaidi, I. Ersoy, D. Shin, and F. Bunyak

Nucleus Detection in H&E Images with Fully Convolutional Regression Networks

Proc. First International Workshop on Deep Learning for Pattern Recognition (DLPR), 2016

Bibtex, PlainText, Google Scholar
#156: J. Kwon, A. Wang, D. J. Burke, H. E. Boudreau, K. J. Lekstrom, A. Korzeniowska, R. Sugamata, Y.-S. Kim, L. Yi, I. Ersoy, S. Jaeger, K. Palaniappan, D. R. Ambruso, S. H. Jackson, and T. L. Leto

Peroxiredoxin 6 (Prdx6) supports NADPH oxidase1 (Nox1)-based superoxide generation and cell migration

Free Radical Biology and Medicine, 2016

cell migration, biomedical

Abstract, Bibtex, PlainText, PDF, DOI, Google Scholar
#173: Z. Al-Milaji, I. Ersoy, K. Palaniappan, and F. Bunyak

Hybrid Deep Learning Framework for the Classification of Epithelial and Stromal Tissues in H&E Images

Proc. First International Workshop on Deep Learning for Pattern Recognition (DLPR), 2016

deep learning, histopathology, segmentation

Bibtex, PlainText, URL, Google Scholar
#154: W. R. Thissell, R. Czajkowski, F. Schrenk, T. Selway, A. J. Ries, S. Patel, P. L. McDermott, R. Moten, R. Rudnicki, G. Seetharaman, I. Ersoy, and K. Palaniappan

A scalable architecture for operational FMV exploitation (AVAA)

Proc. IEEE International Conference on Computer Vision Workshop (ICCVW) Video Summarization for Large-scale Analytics Workshop, 2015

fmv, motion, features, image anlaysis, wami

Abstract, Bibtex, PlainText, PDF, URL, DOI, Google Scholar
#152: M. Poostchi, I. Ersoy, A. Bansal, K. Palaniappan, S. Antani, S. Jaeger, and G. Thoma

Image analysis of blood slides for automatic malaria diagnosis

NIH-IEEE Strategic Conference on Healthcare Innovations and Point-of-Care Technologies for Precision Medicine (HI-POCT), 2015

malaria, biomedical, image analysis

Abstract, Bibtex, PlainText, PDF, URL, Google Scholar
#149: F. Bunyak, A. Hafiane, Z. Al-Milagi, I. Ersoy, A. Haridas, and K. Palaniappan

A segmentation-based multi-scale framework for the classification of epithelial and stromal tissues in H&E images

Proc. IEEE International Conference on Bioinformatics and Biomedicine (BIBM), pgs. 450-453, 2015

biomedical, histopathology, segmentation, classification

Abstract, Bibtex, PlainText, PDF, URL, Google Scholar
#138: Z. Hong, Z. Sun, M. Li, Z. Li, F. Bunyak, I. Ersoy, J. P. Trzeciakowski, M. C. Staiculescu, M. Jin, L. Martinez-Lemus, M. A. Hill, K. Palaniappan, and G. A. Meininger

Vasoactive agonists exert dynamic and coordinated effects on vascular smooth muscle cell elasticity, cytoskeletal remodelling and adhesion

The Journal of Physiology, Volume 592, pgs. 1249-1266, 2014

biomedical, vascular

Abstract, Bibtex, PlainText, PDF, URL, DOI, Google Scholar
#130: Z. Hong, I. Ersoy, M. Sun, F. Bunyak, P. Hampel, Z. Hong, Z. Sun, Z. Li, I. Levitan, G. A. Meininger, and K. Palaniappan

Influence of membrane cholesterol and substrate elasticity on endothelial cell spreading behavior

J. Biomedical Material Research Part A, 2013

cell segmentation, active contours, high content, biomedical

Abstract, Bibtex, PlainText, PDF, PubMed, DOI, Google Scholar
#119: I. Ersoy, K. Palaniappan, G. Seetharaman, and R. Rao

Interactive tracking for persistent wide-area surveillance

Proc. SPIE Conf. Geospatial InfoFusion II (Defense, Security and Sensing: Sensor Data and Information Exploitation), Volume 8396, 2012

wami, tracking, fmv, features, motion, fusion, dod

Abstract, Bibtex, PlainText, PDF, Google Scholar
#118: I. Ersoy, F. Bunyak, J. Higgins, and K. Palaniappan

Coupled edge profile geodesic active contours for red blood cell flow analysis

IEEE Int. Symposium on Biomedical Imaging (ISBI), 2012

cell segmentation, level set active contours, red blood cells, cell tracking, biomedical

Abstract, Bibtex, PlainText, PDF, URL, DOI, Google Scholar
#123: I. Ersoy, K. Palaniappan, and G. Seetharaman

Visual tracking with robust target localization

IEEE Int. Conf. Image Processing, pgs. 1365--1368, 2012

wami, tracking, fmv, features, motion, dod

Abstract, Bibtex, PlainText, PDF, Google Scholar
#113: I. Ersoy, F. Bunyak, K. Palaniappan, and J. Peng

HEp-2 Cell Classification in IIF Images Using ShareBoost

Int. Conf. Pattern Recognition, 2012

cell detection, cell classification, features, texture, machine learning, data mining, biomedical

Abstract, Bibtex, PlainText, PDF, URL, Google Scholar
#99: K. Palaniappan, I. Ersoy, G. Seetharaman, S. Davis, P. Kumar, R. M. Rao, and R. Linderman

Parallel flux tensor analysis for efficient moving object detection

14th Int. Conf. Information Fusion, 2011

parallelization, wami, tracking, fmv, motion, dod

Abstract, Bibtex, PlainText, PDF, URL, Google Scholar
#97: K. Palaniappan, F. Bunyak, P. Kumar, I. Ersoy, S. Jaeger, K. Ganguli, A. Haridas, J. Fraser, R. Rao, and G. Seetharaman

Efficient feature extraction and likelihood fusion for vehicle tracking in low frame rate airborne video

13th Int. Conf. Information Fusion, 2010

wami, tracking, fmv, motion, features, fusion, dod

Abstract, Bibtex, PlainText, PDF, URL, DOI, Google Scholar
#95: K. Palaniappan, I. Ersoy, G. Seetharaman, S. Davis, R. Rao, and R. Linderman

Multicore energy efficient flux tensor for video analysis

IEEE Workshop on Energy Efficient High-Performance Computing (EEHiPC), 2010

parallelization, wami, tracking, fmv, motion, dod

Abstract, Bibtex, PlainText, PDF, URL, Google Scholar
#84: K. Palaniappan, I. Ersoy, A. Hafiane, and G. Seetharaman

Moving object detection in UAV-video using flux tensors

IEEE Int. Geoscience and Remote Sensing Symposium, 2009

wami, tracking, fmv, registration, motion, fusion, dod

Bibtex, PlainText, Google Scholar
#81: I. Ersoy, F. Bunyak, V. Chagin, M. C. Cardoso, and K. Palaniappan

Segmentation and classification of cell cycle phases in fluorescence imaging

Lecture Notes in Computer Science (MICCAI), Volume 5762, pgs. 617--624, 2009

cell detection, cell segmentation, cell classification, features, texture, machine learning, data mining, biomedical

Abstract, Bibtex, PlainText, PDF, PubMed, DOI, Google Scholar
#89: A. Mosig, S. Jaeger, W. Chaofeng, I. Ersoy, S. K. Nath, K. Palaniappan, and S. Chen

Tracking cells in live cell imaging videos using topological alignments

Algorithms in Molecular Biology, Volume 4, pgs. 10p, 2009

cell detection, cell segmentation, cell tracking, features, biomedical

Abstract, Bibtex, PlainText, PDF, URL, DOI, Google Scholar
#79: I. Ersoy, F. Bunyak, M. A. Mackey, and K. Palaniappan

Cell segmentation using Hessian-based detection and contour evolution with directional derivatives

IEEE Int. Conf. Image Processing, pgs. 1804--1807, 2008

cell segmentation, cell detection, active contours, features, biomedical

Abstract, Bibtex, PlainText, PDF, URL, DOI, Google Scholar
#67: I. Ersoy, F. Bunyak, K. Palaniappan, M. Sun, and G. Forgacs

Cell spreading analysis with directed edge profile-guided level set active contours

Lecture Notes in Computer Science (MICCAI), Volume 5241, pgs. 376--383, 2008

cell segmentation, active contours, high content, biomedical

Abstract, Bibtex, PlainText, PDF, PubMed, DOI, Google Scholar
#66: I. Ersoy and K. Palaniappan

Multi-feature contour evolution for automatic live cell segmentation in time lapse imagery

30th IEEE Engineering in Medicine and Biology Society Conf. (EMBC), pgs. 371--374, 2008

cell segmentation, active contours, cell tracking, high content, biomedical

Abstract, Bibtex, PlainText, PDF, PubMed, DOI, Google Scholar
#61: K. Palaniappan, I. Ersoy, and S. K. Nath

Moving object segmentation using the flux tensor for biological video microscopy

Lecture Notes in Computer Science (PCM), Volume 4810, pgs. 483-493, 2007

motion, fusion, tracking, active contours, features

Abstract, Bibtex, PlainText, URL, DOI, Google Scholar