D. K. Ufuktepe, F. Yang, Y. M. Kassim, H. Yu, R. J. Maude, K. Palaniappan, and S. Jaeger. Deep Learning-Based Cell Detection and Extraction in Thin Blood Smears for Malaria Diagnosis. IEEE Applied Imagery Pattern Recognition Workshop (AIPR), pages 1--6, 2021.

Y. M. Kassim, K. Palaniappan, F. Yang, M. Poostchi, N. Palaniappan, R. J. Maude, S. Antani, and S. Jaeger. Clustering-Based Dual Deep Learning Architecture for Detecting Red Blood Cells in Malaria Diagnostic Smears. 2020.

M. Poostchi, I. Ersoy, K. McMenamin, E. Gordon, N. Palaniappan, S. Pierce, R. J. Maude, A. Bansal, P. Srinivasan, L. Miller, K. Palaniappan, G. Thoma, and S. Jaeger. Malaria parasite detection and cell counting for human and mouse using thin blood smear microscopy. Journal of Medical Imaging, International Society for Optics and Photonics, volume 5, issue 4, pages 1-14, December 2018.

Z. Liang, S. Jaeger, G. Thoma, J. Huang, P. Guo, A. Powell, K. Silamut, I. Ersoy, M. Poostchi, K. Palaniappan, and R. J. Maude. CNN - Based Image Analysis for Malaria Diagnosis. Proc. IEEE International Conference on Bioinformatics and Biomedicine (BIBM), December 2016.

J. Kwon, A. Wang, D. J. Burke, H. E. Boudreau, K. J. Lekstrom, A. Korzeniowska, R. Sugamata, Y.-S. Kim, L. Yi, I. Ersoy, S. Jaeger, K. Palaniappan, D. R. Ambruso, S. H. Jackson, and T. L. Leto. Peroxiredoxin 6 (Prdx6) supports NADPH oxidase1 (Nox1)-based superoxide generation and cell migration. Free Radical Biology and Medicine, April 2016.

S. Candemir, S. Jaeger, K. Palaniappan, J. P. Musco, R. Singh, Z. Xue, A. Karargyris, S. Antani, G. Thoma, and C. J. McDonald. Lung segmentation in chest radiographs using anatomical atlases with non-rigid registration. IEEE Trans. Medical Imaging, volume 33, issue 2, pages 577-590, 2014.

S. Jaeger, A. Karargyris, S. Candemir, L. Folio, J. Siegelman, F. Callaghan, Z. Xue, K. Palaniappan, R. Singh, S. Antani, G. Thoma, Y.-X. Wang, P.-X. Lu, and C. J. McDonald. Automatic tuberculosis screening using chest radiographs. IEEE Trans. Medical Imaging, volume 33, issue 2, pages 233-245, 2014.

S. Candemir, S. Jaeger, K. Palaniappan, S. Antani, and G. Thoma. Graph cut based automatic lung boundary detection in chest radiographs. IEEE Healthcare Innovation Conference, 2012.

K. Palaniappan, F. Bunyak, P. Kumar, I. Ersoy, S. Jaeger, K. Ganguli, A. Haridas, J. Fraser, R. Rao, and G. Seetharaman. Efficient feature extraction and likelihood fusion for vehicle tracking in low frame rate airborne video. 13th Int. Conf. Information Fusion, 2010.

S. Jaeger, K. Palaniappan, C. S. Casas-Delucchi, and M. C. Cardoso. Classification of cell cycle phases in 3D confocal microscopy using PCNA and chromocenter features. 7th Indian Conference on Computer Vision, Graphics and Image Processing, 2010.

S. Jaeger, K. Palaniappan, C. S. Casas-Delucchi, and M. C. Cardoso. Dual channel colocalization for cell cycle analysis using 3D confocal microscopy. IEEE Int. Conf. Pattern Recognition, 2010.

A. Mosig, S. Jaeger, W. Chaofeng, I. Ersoy, S. K. Nath, K. Palaniappan, and S. Chen. Tracking cells in live cell imaging videos using topological alignments. Algorithms in Molecular Biology, volume 4, pages 10p, 2009.